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  5. Tin_g04573

Tin_g04573


Description : not classified & original description: none


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04573

Target Alias Description ECC score Gene Family Method Actions
Adi_g011762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g035647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02025 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13304 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g15991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13533.t1 Aspi01Gene13533 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20353.t1 Aspi01Gene20353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30003.t1 Aspi01Gene30003 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47030.t1 Aspi01Gene47030 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020934.37 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g22991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g30300.1 LOC_Os02g30300 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g31610.1 LOC_Os04g31610 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g19272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12894 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g52634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001138 No alias not classified & original description: CDS=458-2101 0.03 OrthoFinder output from all 47 species
Sam_g36277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 389 430
No external refs found!