Aliases : AtRABA1f, RABA1f
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00055p00167390 | ATRABA5C, ARA4,... | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
AT5G59150 | ATRAB-A2D,... | RAB GTPase homolog A2D | 0.03 | OrthoFinder output from all 47 species | |
Als_g37483 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.32G069500.1 | AtRABA1f,... | A-class RAB GTPase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g01480.1 | ATRABA2A,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
MA_129080g0010 | RABA2b,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
MA_15386g0010 | AtRABA1f, RABA1f | A-class RAB GTPase | 0.01 | OrthoFinder output from all 47 species | |
Ore_g27361 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g15145 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0026.g009470 | ATRABA2A,... | A-class RAB GTPase & original description: CDS=131-796 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0044.g013006 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: CDS=103-753 | 0.02 | OrthoFinder output from all 47 species | |
Spa_g16289 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
BP | GO:0045048 | protein insertion into ER membrane | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051205 | protein insertion into membrane | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 14 | 174 |
No external refs found! |