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  5. Tin_g04336

Tin_g04336 (Y14)


Aliases : Y14

Description : component *(Y14) of RNA quality control Exon Junction complex & original description: none


Gene families : OG0003013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04336

Target Alias Description ECC score Gene Family Method Actions
Als_g09101 Y14 component *(Y14) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Als_g23384 Y14 component *(Y14) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Cba_g05693 Y14 component *(Y14) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021351.15 Y14 RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Cre12.g526750 Y14 RNA processing.RNA quality control Exon Junction complex... 0.05 OrthoFinder output from all 47 species
Dde_g04187 Y14 component *(Y14) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species
LOC_Os05g04850.1 Y14, LOC_Os05g04850 component Y14 of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
Mp5g04230.1 Y14 component Y14 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Pp3c7_3000V3.1 Y14, Pp3c7_3000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Smo100512 Y14 RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Solyc06g065470.4.1 Y14, Solyc06g065470 component Y14 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Spa_g44056 Y14 component *(Y14) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 103 171
No external refs found!