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  5. Tin_g04190

Tin_g04190 (ATCSLD3, KJK, CSLD3)


Aliases : ATCSLD3, KJK, CSLD3

Description : mannan synthase *(CSLD) & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00196920 CESA4, NWS2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AMTR_s00137p00043990 MUR10, ATCESA7,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.05 OrthoFinder output from all 47 species
AT2G25540 CESA10 cellulose synthase 10 0.02 OrthoFinder output from all 47 species
AT2G33100 CSLD1, ATCSLD1 cellulose synthase-like D1 0.02 OrthoFinder output from all 47 species
AT4G15290 ATCSLB05, CSLB05, ATCSLB5 Cellulose synthase family protein 0.04 OrthoFinder output from all 47 species
AT4G18780 CESA8, LEW2,... cellulose synthase family protein 0.03 OrthoFinder output from all 47 species
AT4G38190 ATCSLD4, CSLD4 cellulose synthase like D4 0.02 OrthoFinder output from all 47 species
AT5G17420 MUR10, ATCESA7,... Cellulose synthase family protein 0.04 OrthoFinder output from all 47 species
AT5G44030 CESA4, NWS2, IRX5 cellulose synthase A4 0.03 OrthoFinder output from all 47 species
Ala_g13699 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Ala_g14910 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ala_g17281 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ala_g22221 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Als_g48740 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Als_g51753 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Als_g52588 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Als_g52907 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aob_g06076 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aob_g30203 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Aop_g11531 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63761 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene44196.t1 AtCESA1, RSW1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Cba_g33285 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ceric.30G072100.1 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g01048 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20850 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Dac_g34792 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ehy_g06173 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
GSVIVT01021248001 CESA8, LEW2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01023643001 MUR10, ATCESA7,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01023837001 ATH-A, CESA2, ATCESA2 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01028402001 CESA4, NWS2, IRX5 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01030458001 CSLB04, ATCSLB4, ATCSLB04 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Gb_02801 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.04 OrthoFinder output from all 47 species
Gb_07444 AtCESA1, RSW1, CESA1 catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Gb_31853 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
Gb_39671 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.04 OrthoFinder output from all 47 species
LOC_Os01g54620.1 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.06 OrthoFinder output from all 47 species
LOC_Os05g08370.1 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g10770.1 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g24190.1 CESA6, PRC1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g36630.1 ATCSLD5, CSLD5,... D-glucan synthase (CSLF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g36690.1 ATCSLD2, CSLD2,... D-glucan synthase (CSLF) 0.05 OrthoFinder output from all 47 species
LOC_Os08g06380.1 ATCSLD2, CSLD2,... mannan synthase (CSLD). D-glucan synthase (CSLF) 0.07 OrthoFinder output from all 47 species
LOC_Os09g25490.1 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
LOC_Os10g32980.1 CESA4, NWS2,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
Lfl_g06718 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Lfl_g18769 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
MA_10435322g0010 AtCESA1, RSW1, CESA1 Probable cellulose synthase A catalytic subunit 2... 0.02 OrthoFinder output from all 47 species
MA_174181g0010 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
MA_595526g0010 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Mp2g05660.1 ATCSLD3, KJK, CSLD3 catalytic component CesA of cellulose synthase complex.... 0.02 OrthoFinder output from all 47 species
Mp2g05670.1 ATCSLD3, KJK, CSLD3 catalytic component CesA of cellulose synthase complex.... 0.02 OrthoFinder output from all 47 species
Msp_g36063 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Nbi_g06292 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Nbi_g27743 ATCSLD2, CSLD2 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28138 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ore_g09621 MUR10, ATCESA7,... catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Ore_g36488 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.04 OrthoFinder output from all 47 species
Pnu_g06553 CESA09, CESA9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13304 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Pnu_g15169 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18983 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Pnu_g19575 ATCSLD4, CSLD4 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32258 CESA4, NWS2, IRX5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22229 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.05 OrthoFinder output from all 47 species
Smo163575 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Smo75715 ATH-A, CESA2, ATCESA2 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
Solyc02g072240.3.1 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
Solyc05g053560.4.1 CSLD1, ATCSLD1,... mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Solyc07g005840.2.1 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.06 OrthoFinder output from all 47 species
Solyc07g051820.3.1 ATCSLB03,... Cellulose synthase-like protein H1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc07g065660.4.1 ATCSLE1, CSLE1,... Cellulose synthase-like protein E1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g076320.3.1 ATCSLD3, KJK,... mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Solyc09g072820.4.1 CESA4, NWS2,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
Solyc12g056580.2.1 ATH-A, CESA2,... catalytic component CesA of cellulose synthase complex 0.05 OrthoFinder output from all 47 species
Spa_g26497 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g26805 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g38470 ATCSLD3, KJK, CSLD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40617 ATCSLD2, CSLD2 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21851 CESA6, PRC1, IXR2, E112 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Zm00001e002486_P001 ATCSLD3, KJK,... mannan synthase (CSLD) 0.03 OrthoFinder output from all 47 species
Zm00001e004630_P001 CESA4, NWS2,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e004740_P001 ATCSLD3, KJK,... Probable mixed-linked glucan synthase 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e009406_P001 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e009843_P002 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e019828_P001 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e021697_P002 ATCSLD2, CSLD2,... mannan synthase (CSLD). D-glucan synthase (CSLF) 0.04 OrthoFinder output from all 47 species
Zm00001e026711_P001 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
Zm00001e031187_P001 AtCESA1, RSW1,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e033093_P003 IXR1, CEV1,... catalytic component CesA of cellulose synthase complex 0.03 OrthoFinder output from all 47 species
Zm00001e034187_P001 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.04 OrthoFinder output from all 47 species
Zm00001e035207_P001 ATCSLD3, KJK,... D-glucan synthase (CSLF) 0.03 OrthoFinder output from all 47 species
Zm00001e040201_P001 ATCSLD2, CSLD2,... mannan synthase (CSLD). D-glucan synthase (CSLF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 755 1136
IPR005150 Cellulose_synth 387 752
No external refs found!