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  5. Tin_g04083

Tin_g04083 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : not classified & original description: none


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g04083

Target Alias Description ECC score Gene Family Method Actions
Adi_g007671 CID11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46209 CID12, ATRBP37, RBP37 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g13697 CID12, ATRBP37, RBP37 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g40102 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01661 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01757 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G073000.1 CID11, Ceric.30G073000 not classified & original description: pacid=50609234... 0.03 OrthoFinder output from all 47 species
Len_g07278 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12977 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09538 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21845 CID12, ATRBP37, RBP37 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g02795 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17641 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02187 CID12, ATRBP37, RBP37 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g12178 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008973 CID12, ATRBP37, RBP37 not classified & original description: CDS=173-1417 0.03 OrthoFinder output from all 47 species
Sam_g25452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
InterPro domains Description Start Stop
IPR009818 Ataxin-2_C 216 229
IPR000504 RRM_dom 270 332
IPR000504 RRM_dom 367 433
No external refs found!