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  5. Tin_g03946

Tin_g03946 (GFA2)


Aliases : GFA2

Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0001086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03946
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Cre12.g551500 GFA2 Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Nbi_g24757 GFA2 co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g081330.3.1 ATJ1, Solyc01g081330 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 91 153
IPR001305 HSP_DnaJ_Cys-rich_dom 232 292
IPR002939 DnaJ_C 205 417
No external refs found!