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  5. Tin_g03889

Tin_g03889


Description : substrate adaptor of SCF E3 ubiquiTin ligase *(SLY) & original description: none


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03889

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00120290 evm_27.TU.AmTr_v1... Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G27310 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
Aev_g04411 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Als_g60927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04265 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aob_g07109 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aop_g01209 SLY2 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24799.t1 Aspi01Gene24799 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32683.t2 Aspi01Gene32683 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Dcu_g11655 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01011119001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08961 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
LOC_Os01g49154.1 LOC_Os01g49154 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g10650 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
MA_164016g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_196364g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
MA_3236g0010 SLY2 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
MA_9868304g0010 SLY1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g08673 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Ore_g18489 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g26122 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Pnu_g17370 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Zm00001e014737_P001 Zm00001e014737 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014934_P001 SLY1, Zm00001e014934 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA

No InterPro domains available for this sequence

No external refs found!