Description : small subunit sigma of AP-4 vacuole cargo adaptor complex & original description: none
Gene families : OG0006894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006894_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g03691 | |
Cluster | HCCA: Cluster_181 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene10259.t1 | Aspi01Gene10259 | small subunit sigma of AP-4 vacuole cargo adaptor... | 0.04 | OrthoFinder output from all 47 species | |
Cre07.g330950 | No alias | Vesicle trafficking.endomembrane trafficking.vacuolar... | 0.03 | OrthoFinder output from all 47 species | |
MA_23830g0010 | No alias | AP-4 complex subunit sigma OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g026130.3.1 | Solyc05g026130 | small subunit sigma of AP-4 vacuole cargo adaptor complex | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e022339_P001 | Zm00001e022339 | small subunit sigma of AP-4 vacuole cargo adaptor complex | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003779 | actin binding | IEP | HCCA |
MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
BP | GO:0034227 | tRNA thio-modification | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022775 | AP_mu_sigma_su | 2 | 141 |
No external refs found! |