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  5. Tin_g03239

Tin_g03239 (FLK)


Aliases : FLK

Description : regulatory protein *(PEP) of autonomous floral-promotion pathway & original description: none


Gene families : OG0001316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03239
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00195630 PEP,... RNA-binding KH domain-containing protein PEPPER... 0.02 OrthoFinder output from all 47 species
AMTR_s00002p00263460 FLK,... Flowering locus K homology domain OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G04610 FLK RNA-binding KH domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g020503 FLK not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37087 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Azfi_s0151.g053333 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Cba_g01893 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Cba_g18547 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Cba_g27056 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Ceric.34G035300.1 FLK, Ceric.34G035300 not classified & original description: pacid=50623262... 0.04 OrthoFinder output from all 47 species
Ceric.39G044000.1 FLK, Ceric.39G044000 regulatory protein *(PEP) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Dcu_g05441 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Dcu_g06211 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Dde_g04373 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Ehy_g07605 FLK regulatory protein *(FLK) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Ehy_g17524 FLK regulatory protein *(FLK) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
GSVIVT01036237001 FLK Flowering locus K homology domain OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_28050 FLK Flowering locus K homology domain OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10428218g0010 FLK Flowering locus K homology domain OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_175360g0010 FLK Flowering locus K homology domain OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Ore_g10659 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.05 OrthoFinder output from all 47 species
Ore_g20695 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Pir_g00516 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.04 OrthoFinder output from all 47 species
Pir_g05546 FLK regulatory protein *(PEP) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Sam_g13831 No alias regulatory protein *(PEP) of autonomous floral-promotion... 0.03 OrthoFinder output from all 47 species
Sam_g14450 No alias regulatory protein *(PEP) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Solyc01g097010.3.1 FLK, Solyc01g097010 Flowering locus K homology domain OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e002374_P003 PEP, Zm00001e002374 RNA-binding KH domain-containing protein PEPPER... 0.03 OrthoFinder output from all 47 species
Zm00001e037859_P001 PEP, Zm00001e037859 RNA-binding KH domain-containing protein PEPPER... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 148 214
IPR004088 KH_dom_type_1 55 111
IPR004088 KH_dom_type_1 323 386
No external refs found!