Tin_g03128 (AL2)

Aliases : AL2

Description : methylation reader Alfin of PRC1 complex & original description: none

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g03128

Target	Alias	Description	ECC score	Gene Family Method
Adi_g060785	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Als_g06205	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Als_g11260	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0093.g043317	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Cba_g23274	AL1	methylation reader Alfin of PRC1 complex & original...	0.04	OrthoFinder output from all 47 species
Cba_g26963	AL2	methylation reader Alfin of PRC1 complex & original...	0.04	OrthoFinder output from all 47 species
Cba_g33236	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Cba_g33237	AL1	methylation reader Alfin of PRC1 complex & original...	0.04	OrthoFinder output from all 47 species
Cba_g70690	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Ceric.26G041400.1	AL1, Ceric.26G041400	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Sam_g19302	No alias	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Solyc01g102750.3.1	AL7, Solyc01g102750	Alfin-like transcription factor	0.03	OrthoFinder output from all 47 species
Solyc07g041190.3.1	AL5, Solyc07g041190	Alfin-like transcription factor	0.01	OrthoFinder output from all 47 species
Spa_g48954	AL1	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Zm00001e035527_P001	AL5, Zm00001e035527	Alfin-like transcription factor	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005669	transcription factor TFIID complex	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
CC	GO:0008023	transcription elongation factor complex	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
CC	GO:0016593	Cdc73/Paf1 complex	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	193	241
IPR021998	Alfin_N	14	137

External Links

No external refs found!

Tin_g03128 (AL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation