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  5. Tin_g03071

Tin_g03071 (PRA1.A1)


Aliases : PRA1.A1

Description : A-class Rab-GDF protein & original description: none


Gene families : OG0002691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03071
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Aop_g01544 PRA1.A1 A-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.7 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os05g38160.1 PRA1.A1, LOC_Os05g38160 A-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 20 193
No external refs found!