Tin_g02908

Description : not classified & original description: none

Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g02908

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00247870	evm_27.TU.AmTr_v1...	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
AT4G24860	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
Adi_g076970	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g095752	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01567	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g14020	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g27974	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02714	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g20700	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g33985	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g14828	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0805.g087571	No alias	not classified & original description: CDS=256-3405	0.03	OrthoFinder output from all 47 species
Cba_g05976	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g62281	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.02G079000.1	Ceric.02G079000	not classified & original description: pacid=50585939...	0.03	OrthoFinder output from all 47 species
Ceric.14G049600.1	Ceric.14G049600	not classified & original description: pacid=50633231...	0.04	OrthoFinder output from all 47 species
Ceric.21G078500.1	Ceric.21G078500	not classified & original description: pacid=50604341...	0.06	OrthoFinder output from all 47 species
Dac_g03850	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g13726	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g21489	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g31555	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g04007	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g15909	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g04006	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_15617	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_15618	No alias	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
LOC_Os02g51400.1	LOC_Os02g51400	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
LOC_Os11g43970.1	LOC_Os11g43970	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
Lfl_g09487	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10428622g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_48428g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Ore_g04513	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29682	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc06g084530.3.1	Solyc06g084530	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
Solyc09g074950.3.1	Solyc09g074950	ATPase family AAA domain-containing protein FIGL1...	0.03	OrthoFinder output from all 47 species
Spa_g52330	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e011359_P005	Zm00001e011359	ATPase family AAA domain-containing protein FIGL1...	0.07	OrthoFinder output from all 47 species
Zm00001e021043_P002	Zm00001e021043	ATPase family AAA domain-containing protein FIGL1...	0.08	OrthoFinder output from all 47 species
Zm00001e038215_P002	Zm00001e038215	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0045048	protein insertion into ER membrane	IEP	HCCA
BP	GO:0051205	protein insertion into membrane	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	1151	1187
IPR000253	FHA_dom	166	234
IPR003959	ATPase_AAA_core	998	1127

External Links

No external refs found!

Tin_g02908

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation