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  5. Tin_g02831

Tin_g02831 (ATROPGEF1, ROPGEF1)


Aliases : ATROPGEF1, ROPGEF1

Description : RopGEF guanine nucleotide exchange factor *(PRONE) & original description: none


Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02831
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00182400 ATROPGEF1,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00249740 ROPGEF7,... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00064220 ROPGEF8,... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
AT3G55660 ROPGEF6, ATROPGEF6 ROP (rho of plants) guanine nucleotide exchange factor 6 0.03 OrthoFinder output from all 47 species
AT4G38430 ATROPGEF1, ROPGEF1 rho guanyl-nucleotide exchange factor 1 0.02 OrthoFinder output from all 47 species
AT5G02010 ROPGEF7, ATROPGEF7 RHO guanyl-nucleotide exchange factor 7 0.02 OrthoFinder output from all 47 species
Azfi_s0084.g038941 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Ceric.04G001800.1 ROPGEF8,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01015369001 ROPGEF8, ATROPGEF8 Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01017070001 ROPGEF12, MEE64,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
GSVIVT01023897001 ATROPGEF1, ROPGEF1 Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
GSVIVT01034063001 ROPGEF7, ATROPGEF7 Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
LOC_Os01g48410.1 ATROPGEF9,... PRONE-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
LOC_Os01g62990.1 ROPGEF7,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
LOC_Os02g17240.1 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g47170.1 ROPGEF3,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
LOC_Os09g37270.1 ATROPGEF1,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
MA_66695g0010 ROPGEF7, ATROPGEF7 PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Nbi_g08604 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.07 OrthoFinder output from all 47 species
Nbi_g10291 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Ppi_g03194 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013221 ROPGEF8, ATROPGEF8 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026117 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Sam_g13861 No alias RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Solyc08g006550.4.1 ATROPGEF5,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Solyc12g044270.2.1 ROPGEF12, MEE64,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Spa_g11889 ATROPGEF9, ROPGEF9 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Spa_g30949 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Zm00001e010284_P002 ATROPGEF1,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Zm00001e014205_P002 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Zm00001e015569_P002 ROPGEF14,... PRONE-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Zm00001e019750_P001 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Zm00001e024760_P001 ROPGEF8,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Zm00001e026925_P001 ROPGEF7,... PRONE-type RopGEF guanine nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Zm00001e034952_P003 ATROPGEF1,... PRONE-type RopGEF guanine nucleotide exchange factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR005512 PRONE_dom 142 507
No external refs found!