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  5. Tin_g02369

Tin_g02369


Description : component *(eL33) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02369
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00195890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT1G07070 No alias Ribosomal protein L35Ae family protein 0.09 OrthoFinder output from all 47 species
AT1G41880 No alias Ribosomal protein L35Ae family protein 0.12 OrthoFinder output from all 47 species
AT1G74270 No alias Ribosomal protein L35Ae family protein 0.12 OrthoFinder output from all 47 species
AT3G55750 No alias Ribosomal protein L35Ae family protein 0.07 OrthoFinder output from all 47 species
Adi_g018361 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g031092 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g090260 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g107649 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g107650 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g126470 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aev_g28061 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g22035 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Ala_g23556 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Als_g13844 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g28942 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Aop_g32442 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.2 OrthoFinder output from all 47 species
Aop_g51649 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g56103 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g69261 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g026089 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cba_g08233 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.13G067800.1 Ceric.13G067800 component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.29G046600.1 Ceric.29G046600 component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020723.23 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 OrthoFinder output from all 47 species
Cre10.g459250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 OrthoFinder output from all 47 species
Dac_g00151 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dac_g01908 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Dac_g27352 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Dac_g28494 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Dcu_g24483 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g24788 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g31025 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Ehy_g04105 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01016386001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder output from all 47 species
GSVIVT01034025001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder output from all 47 species
Gb_35488 No alias component RPL35a of LSU proteome component 0.13 OrthoFinder output from all 47 species
LOC_Os02g54470.1 LOC_Os02g54470 component RPL35a of LSU proteome component 0.15 OrthoFinder output from all 47 species
Len_g50836 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g11760 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g19455 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Lfl_g20427 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g29504 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
MA_79041g0010 No alias component RPL35a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp1g11470.1 No alias component RPL35a of LSU proteome component 0.17 OrthoFinder output from all 47 species
Msp_g02611 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Msp_g38265 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g37313 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ore_g40048 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g03777 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g53979 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g58201 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c11_9630V3.1 Pp3c11_9630 Ribosomal protein L35Ae family protein 0.13 OrthoFinder output from all 47 species
Pp3c3_3480V3.1 Pp3c3_3480 Ribosomal protein L35Ae family protein 0.07 OrthoFinder output from all 47 species
Pp3c4_29970V3.1 Pp3c4_29970 Ribosomal protein L35Ae family protein 0.04 OrthoFinder output from all 47 species
Ppi_g13400 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g25850 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g52763 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004691 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027080 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.13 OrthoFinder output from all 47 species
Sam_g00161 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g05626 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g06981 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g21165 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Sam_g24989 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g28484 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Sam_g38110 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g38788 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Sam_g42222 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Smo184773 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Solyc03g096360.4.1 Solyc03g096360 component RPL35a of LSU proteome component 0.07 OrthoFinder output from all 47 species
Solyc05g052800.3.1 Solyc05g052800 component RPL35a of LSU proteome component 0.21 OrthoFinder output from all 47 species
Solyc05g052810.4.1 Solyc05g052810 component RPL35a of LSU proteome component 0.16 OrthoFinder output from all 47 species
Spa_g05815 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Spa_g43199 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Zm00001e009729_P001 Zm00001e009729 component RPL35a of LSU proteome component 0.12 OrthoFinder output from all 47 species
Zm00001e023741_P003 Zm00001e023741 component RPL35a of LSU proteome component 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 11 105
No external refs found!