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  5. Tin_g02184

Tin_g02184


Description : component *(TASH3) of TPLATE AP-2 co-adaptor complex & original description: none


Gene families : OG0004200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02184

Target Alias Description ECC score Gene Family Method Actions
AT2G07360 No alias SH3 domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g012263 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Aev_g03405 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ala_g04411 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Als_g06409 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Aob_g04488 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014845 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Cba_g01323 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ceric.19G017700.1 Ceric.19G017700 component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Cre08.g384864 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g10947 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01022289001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Gb_19640 No alias component TASH3 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Len_g00758 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g10824 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Mp2g09190.1 No alias component TASH3 of TPLATE AP-2 co-adaptor complex 0.01 OrthoFinder output from all 47 species
Nbi_g02456 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Pir_g19886 No alias component *(TASH3) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Solyc05g025750.3.1 Solyc05g025750 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e001169_P001 Zm00001e001169 component TASH3 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 1153 1195
No external refs found!