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  5. Tin_g02150

Tin_g02150


Description : component *(APC5) of (APC/C)-dependent ubiquiTination platform subcomplex & original description: none


Gene families : OG0004795 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004795_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02150

Target Alias Description ECC score Gene Family Method Actions
AT1G06590 No alias unknown protein; Has 380 Blast hits to 268 proteins in... 0.03 OrthoFinder output from all 47 species
Cre01.g034650 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01020836001 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.06 OrthoFinder output from all 47 species
LOC_Os12g43120.1 LOC_Os12g43120 component APC5 of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Mp3g02010.1 No alias component APC5 of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Sam_g26228 No alias component *(APC5) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Smo104828 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR026000 Apc5_dom 328 426
No external refs found!