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  5. Tin_g01900

Tin_g01900


Description : not classified & original description: none


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01900
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Adi_g066481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28945.t1 ARAD1, Aspi01Gene28945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035309 No alias not classified & original description: CDS=67-1440 0.03 OrthoFinder output from all 47 species
Cba_g14163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g37960.1 ARAD1, LOC_Os07g37960 1,5-alpha-arabinosyltransferase 0.02 OrthoFinder output from all 47 species
Ore_g01332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44605 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g63143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 72 382
No external refs found!