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  5. Tin_g01860

Tin_g01860 (GGPS1)


Aliases : GGPS1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & original description: none


Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01860
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT2G23800 GGPS2, GGPS5 geranylgeranyl pyrophosphate synthase 2 0.03 OrthoFinder output from all 47 species
AT3G20160 No alias Terpenoid synthases superfamily protein 0.02 OrthoFinder output from all 47 species
Aob_g04946 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aob_g07182 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Aob_g08889 GGPS1 isoprenyl diphosphate synthase *(IDS) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene55727.t1 GGPS1, Aspi01Gene55727 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
GSVIVT01009654001 GGPS1 Secondary metabolism.terpenoids.methylerythritol... 0.03 OrthoFinder output from all 47 species
LOC_Os01g14630.1 GGPS1, LOC_Os01g14630 isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
Len_g00500 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Len_g07265 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Lfl_g01814 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Pnu_g07785 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Spa_g08698 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Spa_g30144 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.01 OrthoFinder output from all 47 species
Zm00001e035362_P001 GGPS1, Zm00001e035362 isoprenyl diphosphate synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 111 350
No external refs found!