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  5. Tin_g01763

Tin_g01763 (RGLG2)


Aliases : RGLG2

Description : E3 ubiquiTin ligase *(RGLG) & original description: none


Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01763
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00153710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G67800 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.02 OrthoFinder output from all 47 species
AT5G63970 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.02 OrthoFinder output from all 47 species
Aop_g57714 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26787.t1 Aspi01Gene26787 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47149.t1 Aspi01Gene47149 E3 ubiquitin ligase *(RGLG) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14917 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G037400.1 Ceric.06G037400 E3 ubiquitin ligase *(RGLG) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g22498 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24041 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01458 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000570001 RGLG2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01002586001 RGLG2 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01026456001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os06g40650.1 RGLG2, LOC_Os06g40650 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
LOC_Os12g19030.1 RGLG2, LOC_Os12g19030 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Mp6g16390.1 RGLG2 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Mp6g16430.1 RGLG2 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Pir_g06816 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41163 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48142 RGLG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07448 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57188 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029296_P001 Zm00001e029296 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.03 OrthoFinder output from all 47 species
Zm00001e030550_P001 RGLG2, Zm00001e030550 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010734 Copine_C 81 296
No external refs found!