1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g01647

Tin_g01647


Description : not classified & original description: none


Gene families : OG0001676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001676_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01647
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00076840 evm_27.TU.AmTr_v1... Rhodanese-like domain-containing protein 10... 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00014960 evm_27.TU.AmTr_v1... Rhodanese-like domain-containing protein 9,... 0.03 OrthoFinder output from all 47 species
AT2G42220 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.11 OrthoFinder output from all 47 species
AT3G08920 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g34354 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G060800.1 Ceric.12G060800 not classified & original description: pacid=50601365... 0.03 OrthoFinder output from all 47 species
Cre13.g602650 No alias Rhodanese-like domain-containing protein 11,... 0.03 OrthoFinder output from all 47 species
Dcu_g09710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011156001 No alias Rhodanese-like domain-containing protein 10... 0.03 OrthoFinder output from all 47 species
LOC_Os09g10750.1 LOC_Os09g10750 Rhodanese-like domain-containing protein 9,... 0.07 OrthoFinder output from all 47 species
MA_10436404g0010 No alias Rhodanese-like domain-containing protein 9,... 0.03 OrthoFinder output from all 47 species
Mp1g07610.1 No alias Rhodanese-like domain-containing protein 9,... 0.03 OrthoFinder output from all 47 species
Ore_g03010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 103 214
No external refs found!