Tin_g01597 (AL1)


Aliases : AL1

Description : methylation reader Alfin of PRC1 complex & original description: none


Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01597

Target Alias Description ECC score Gene Family Method Actions
AT3G42790 AL3 alfin-like 3 0.03 OrthoFinder output from all 47 species
AT5G20510 AL5 alfin-like 5 0.03 OrthoFinder output from all 47 species
Adi_g019486 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Adi_g102186 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.27G046800.1 AL1, Ceric.27G046800 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Cre07.g320950 AL2 RNA biosynthesis.transcriptional activation.Alfin-like... 0.02 OrthoFinder output from all 47 species
Solyc09g005360.3.1 AL1, Solyc09g005360 Alfin-like transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e014851_P004 AL5, Zm00001e014851 Alfin-like transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 187 235
IPR021998 Alfin_N 9 134
No external refs found!