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  5. Tin_g01591

Tin_g01591


Description : protein involved in PS-II assembly *(Psb33) & original description: none


Gene families : OG0003633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01591
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00029990 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT1G71500 No alias Rieske (2Fe-2S) domain-containing protein 0.15 OrthoFinder output from all 47 species
Aev_g09772 No alias protein involved in PS-II assembly *(Psb33) & original... 0.1 OrthoFinder output from all 47 species
Ala_g01051 No alias protein involved in PS-II assembly *(Psb33) & original... 0.08 OrthoFinder output from all 47 species
Als_g08451 No alias protein involved in PS-II assembly *(Psb33) & original... 0.09 OrthoFinder output from all 47 species
Als_g11770 No alias protein involved in PS-II assembly *(Psb33) & original... 0.07 OrthoFinder output from all 47 species
Aob_g00988 No alias protein involved in PS-II assembly *(Psb33) & original... 0.08 OrthoFinder output from all 47 species
Aop_g06553 No alias protein involved in PS-II assembly *(Psb33) & original... 0.13 OrthoFinder output from all 47 species
Aspi01Gene15023.t1 Aspi01Gene15023 protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0212.g058145 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Cba_g14675 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G079700.1 Ceric.16G079700 protein involved in PS-II assembly *(Psb33) & original... 0.11 OrthoFinder output from all 47 species
Ceric.32G073500.1 Ceric.32G073500 protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Cre09.g411200 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g07653 No alias protein involved in PS-II assembly *(Psb33) & original... 0.09 OrthoFinder output from all 47 species
Dcu_g20317 No alias protein involved in PS-II assembly *(Psb33) & original... 0.09 OrthoFinder output from all 47 species
Dde_g09027 No alias protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g15961 No alias protein involved in PS-II assembly *(Psb33) & original... 0.12 OrthoFinder output from all 47 species
GSVIVT01036428001 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Gb_17341 No alias Psb33 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
LOC_Os11g13850.2 LOC_Os11g13850 Psb33 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Len_g00495 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Len_g01078 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g02682 No alias protein involved in PS-II assembly *(Psb33) & original... 0.07 OrthoFinder output from all 47 species
Lfl_g19856 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Mp1g07060.1 No alias Psb33 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Msp_g01090 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Msp_g04633 No alias protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g07139 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Ore_g30344 No alias protein involved in PS-II assembly *(Psb33) & original... 0.09 OrthoFinder output from all 47 species
Pir_g11115 No alias protein involved in PS-II assembly *(Psb33) & original... 0.12 OrthoFinder output from all 47 species
Pnu_g01988 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g30084 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007893 No alias protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
Sam_g08540 No alias protein involved in PS-II assembly *(Psb33) & original... 0.07 OrthoFinder output from all 47 species
Sam_g49855 No alias protein involved in PS-II assembly *(Psb33) & original... 0.02 OrthoFinder output from all 47 species
Solyc11g042640.2.1 Solyc11g042640 Psb33 protein involved in PS-II assembly 0.11 OrthoFinder output from all 47 species
Spa_g09786 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Spa_g54860 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e018788_P001 Zm00001e018788 Psb33 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR012748 Rieske-like_NirD 82 194
No external refs found!