1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g01514

Tin_g01514 (BB2, BB)


Aliases : BB2, BB

Description : E3 ubiquiTin ligase *(EOD1) & original description: none


Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01514

Target Alias Description ECC score Gene Family Method Actions
Aop_g07059 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032082001 BB2, BB Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_18500 BB2, BB E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g07790.1 BB2, BB, LOC_Os03g07790 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g03370 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g15889 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e000545_P002 BB2, BB, Zm00001e000545 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e024685_P001 Zm00001e024685 E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e029867_P003 BB2, BB, Zm00001e029867 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e038893_P003 BB2, BB, Zm00001e038893 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 177 219
No external refs found!