Tin_g01151 (CNGC15, ATCNGC15)

Aliases : CNGC15, ATCNGC15

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g01151

Target	Alias	Description	ECC score	Gene Family Method
AT3G17700	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-binding transporter 1	0.02	OrthoFinder output from all 47 species
Ala_g05813	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0301.g063721	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Dac_g14388	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
LOC_Os03g55100.1	DND1, ATCNGC2,...	cyclic nucleotide-gated cation channel (CNGC)....	0.03	OrthoFinder output from all 47 species
LOC_Os06g08850.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Pir_g38103	DND1, ATCNGC2, CNGC2	temperature sensor protein *(CNGC2) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g23383	DND2, CNGC4,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g39902	No alias	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Solyc07g005590.3.1	CNGC5, ATCNGC5,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Solyc07g006510.3.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Solyc08g069140.4.1	ATCNGC14,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Spa_g00978	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Zm00001e006772_P003	CNGC5, ATCNGC5,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Zm00001e012009_P001	DND1, ATCNGC2,...	cyclic nucleotide-gated cation channel (CNGC)....	0.02	OrthoFinder output from all 47 species
Zm00001e030701_P001	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Zm00001e034885_P002	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006542	glutamine biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	87	405

External Links

No external refs found!

Tin_g01151 (CNGC15, ATCNGC15)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation