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  5. Tin_g01142

Tin_g01142


Description : not classified & original description: none


Gene families : OG0005157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01142
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Als_g09325 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Als_g10839 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g09148 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Aspi01Gene02972.t1 Aspi01Gene02972 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene45715.t1 Aspi01Gene45715 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.24G080800.1 Ceric.24G080800 not classified & original description: pacid=50629443... 0.22 OrthoFinder output from all 47 species
Ceric.35G069300.1 Ceric.35G069300 not classified & original description: pacid=50581043... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001073.15 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre06.g286800 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_11751 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Gb_20984 No alias no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
Gb_30655 No alias no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
Len_g14582 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Len_g59794 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_10436924g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_15709g0010 No alias no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
MA_83720g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Msp_g31263 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g04358 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Pnu_g00756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025102 No alias not classified & original description: CDS=68-1027 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR029344 SLBP_RNA_bind 499 566
No external refs found!