Description : not classified & original description: none
Gene families : OG0005157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005157_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g01142 | |
Cluster | HCCA: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g09325 | No alias | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
Als_g10839 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Aop_g09148 | No alias | not classified & original description: none | 0.19 | OrthoFinder output from all 47 species | |
Aspi01Gene02972.t1 | Aspi01Gene02972 | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Aspi01Gene45715.t1 | Aspi01Gene45715 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ceric.24G080800.1 | Ceric.24G080800 | not classified & original description: pacid=50629443... | 0.22 | OrthoFinder output from all 47 species | |
Ceric.35G069300.1 | Ceric.35G069300 | not classified & original description: pacid=50581043... | 0.11 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001073.15 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Cre06.g286800 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Gb_11751 | No alias | no hits & (original description: none) | 0.15 | OrthoFinder output from all 47 species | |
Gb_20984 | No alias | no hits & (original description: none) | 0.2 | OrthoFinder output from all 47 species | |
Gb_30655 | No alias | no hits & (original description: none) | 0.17 | OrthoFinder output from all 47 species | |
Len_g14582 | No alias | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
Len_g59794 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
MA_10436924g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_15709g0010 | No alias | no hits & (original description: none) | 0.19 | OrthoFinder output from all 47 species | |
MA_83720g0010 | No alias | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
Msp_g31263 | No alias | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
Nbi_g04358 | No alias | not classified & original description: none | 0.17 | OrthoFinder output from all 47 species | |
Pnu_g00756 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0187.g025102 | No alias | not classified & original description: CDS=68-1027 | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | HCCAGO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
CC | GO:0000796 | condensin complex | IEP | HCCA |
CC | GO:0000808 | origin recognition complex | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0007076 | mitotic chromosome condensation | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0022402 | cell cycle process | IEP | HCCA |
BP | GO:0030261 | chromosome condensation | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR029344 | SLBP_RNA_bind | 499 | 566 |
No external refs found! |