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  5. Tin_g01051

Tin_g01051


Description : subunit theta *(CCT8) of CCT chaperonin folding complex & original description: none


Gene families : OG0006803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01051

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00079950 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
AT3G03960 No alias TCP-1/cpn60 chaperonin family protein 0.07 OrthoFinder output from all 47 species
Adi_g077191 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Als_g08346 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Aob_g12737 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Aop_g12393 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Aspi01Gene19178.t1 Aspi01Gene19178 subunit theta *(CCT8) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Cba_g03961 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Ceric.23G020400.1 Ceric.23G020400 subunit theta *(CCT8) of CCT chaperonin folding complex... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000157.20 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Cre03.g168450 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Dac_g02248 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Dcu_g02964 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01033394001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
LOC_Os03g59020.1 LOC_Os03g59020 CCT8 subunit theta of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
Len_g04761 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
MA_100776g0010 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Mp6g01500.1 No alias CCT8 subunit theta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Ore_g16783 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Pir_g00611 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Sam_g19951 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Solyc01g088080.3.1 Solyc01g088080 CCT8 subunit theta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Spa_g04596 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.06 OrthoFinder output from all 47 species
Spa_g42414 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Spa_g56213 No alias subunit theta *(CCT8) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Zm00001e011242_P002 Zm00001e011242 CCT8 subunit theta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Zm00001e024443_P002 Zm00001e024443 CCT8 subunit theta of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 38 528
No external refs found!