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  5. Tin_g00944

Tin_g00944


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquiTin ligase complex & original description: none


Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00944

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00223970 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g080527 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g38850 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01020023001 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_09513 No alias F-box/kelch-repeat protein At3g27150 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g07530.1 LOC_Os03g07530 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g33944 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g31151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017403 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo14013 No alias F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo33540 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e004827_P001 Zm00001e004827 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e021211_P001 Zm00001e021211 F-box/kelch-repeat protein At1g26930 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e023895_P005 Zm00001e023895 F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 279 323
IPR006652 Kelch_1 230 275
No external refs found!