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  5. Tin_g00461

Tin_g00461


Description : subunit epsilon of coat protein complex & original description: none


Gene families : OG0004408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00461
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT1G30630 No alias Coatomer epsilon subunit 0.04 OrthoFinder output from all 47 species
Adi_g014852 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Aev_g00661 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Als_g22069 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g19947 No alias subunit epsilon of coat protein complex & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0003.g007572 No alias subunit epsilon of coat protein complex & original... 0.06 OrthoFinder output from all 47 species
Ceric.10G089800.1 Ceric.10G089800 subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Dcu_g00711 No alias subunit epsilon of coat protein complex & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01021747001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_19817 No alias subunit epsilon of coat protein complex 0.04 OrthoFinder output from all 47 species
LOC_Os04g52270.1 LOC_Os04g52270 subunit epsilon of coat protein complex 0.02 OrthoFinder output from all 47 species
Mp1g28220.1 No alias subunit epsilon of coat protein complex 0.03 OrthoFinder output from all 47 species
Pir_g01239 No alias subunit epsilon of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Smo166040 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Solyc02g069585.1.1 Solyc02g069585 subunit epsilon of coat protein complex 0.04 OrthoFinder output from all 47 species
Spa_g11511 No alias subunit epsilon of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e041631_P001 Zm00001e041631 subunit epsilon of coat protein complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!