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  5. Tin_g00345

Tin_g00345


Description : not classified & original description: none


Gene families : OG0009876 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00345

Target Alias Description ECC score Gene Family Method Actions
Ala_g14939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00293 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Aspi01Gene11542.t1 Aspi01Gene11542 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0319.g064448 No alias not classified & original description: CDS=1-549 0.03 OrthoFinder output from all 47 species
Ceric.03G063600.1 Ceric.03G063600 not classified & original description: pacid=50572505... 0.1 OrthoFinder output from all 47 species
Ceric.08G047800.1 DRT112, PETE2,... not classified & original description: pacid=50638189... 0.08 OrthoFinder output from all 47 species
Ceric.34G029800.1 Ceric.34G029800 not classified & original description: pacid=50623250... 0.01 OrthoFinder output from all 47 species
Dac_g01986 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Dcu_g00411 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g25627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08546 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g21029 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g12705 DRT112, PETE2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g05591 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g00240 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g11153 DRT112, PETE2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018495 PETE1 not classified & original description: CDS=1-633 0.04 OrthoFinder output from all 47 species
Sam_g04763 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g14165 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g10207 DRT112, PETE2 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g10633 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000923 BlueCu_1 77 177
No external refs found!