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  5. Pir_g66548

Pir_g66548 (ACT7)


Aliases : ACT7

Description : actin filament protein & original description: none


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g66548

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00045700 ACT7,... Cytoskeleton.microfilament network.actin filament protein 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00109910 ACT7,... Cytoskeleton.microfilament network.actin filament protein 0.02 OrthoFinder output from all 47 species
AT1G49240 ACT8 actin 8 0.03 OrthoFinder output from all 47 species
AT3G18780 DER1, LSR2, ACT2, ENL2 actin 2 0.04 OrthoFinder output from all 47 species
Adi_g104499 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104503 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12311 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27534 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17259 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18453 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07236 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009647 ACT7 actin filament protein & original description: CDS=1-1191 0.03 OrthoFinder output from all 47 species
Cba_g22713 AAc1, ACT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G030400.1 ACT7, Ceric.01G030400 actin filament protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G034800.1 ACT7, Ceric.27G034800 actin filament protein & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020904.106 DER1, LSR2, ACT2, ENL2 Actin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g05051 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09029 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19069 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04045 ACT11 actin filament protein 0.05 OrthoFinder output from all 47 species
Gb_08812 ACT7 actin filament protein 0.04 OrthoFinder output from all 47 species
Gb_24792 AAc1, ACT1 actin filament protein 0.04 OrthoFinder output from all 47 species
Len_g12213 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12214 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18457 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28710 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g10990.1 ACT11 actin filament protein 0.05 OrthoFinder output from all 47 species
Mp6g11010.1 ACT7 actin filament protein 0.05 OrthoFinder output from all 47 species
Nbi_g06176 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46457 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001863 ACT7 actin filament protein & original description: CDS=1-1344 0.03 OrthoFinder output from all 47 species
Smo178381 ACT7 Cytoskeleton.microfilament network.actin filament protein 0.02 OrthoFinder output from all 47 species
Spa_g20294 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22103 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29528 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41495 ACT11 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 96 468
No external refs found!