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  5. Pir_g64932

Pir_g64932


Description : storage vacuole protein sorting receptor *(RMR) & original description: none


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g64932

Target Alias Description ECC score Gene Family Method Actions
AT4G09560 No alias Protease-associated (PA) RING/U-box zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g086176 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g07130.2 LOC_Os03g07130 vacuolar sorting receptor (RMR) 0.02 OrthoFinder output from all 47 species
  • Neighborhood comparison
    		•
    Tin_g10147 No alias storage vacuole protein sorTing receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
    Zm00001e003223_P001 Zm00001e003223 vacuolar sorting receptor (RMR) 0.02 OrthoFinder output from all 47 species

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
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    Type GO Term Name Evidence Source
    MF GO:0003674 molecular_function IEP HCCA
    MF GO:0003676 nucleic acid binding IEP HCCA
    MF GO:0005488 binding IEP HCCA
    CC GO:0005634 nucleus IEP HCCA
    MF GO:0016409 palmitoyltransferase activity IEP HCCA
    MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
    MF GO:0031072 heat shock protein binding IEP HCCA
    MF GO:0051082 unfolded protein binding IEP HCCA
    MF GO:0097159 organic cyclic compound binding IEP HCCA
    MF GO:1901363 heterocyclic compound binding IEP HCCA
    InterPro domains Description Start Stop
    IPR003137 PA_domain 133 199
    IPR001841 Znf_RING 291 334
    No external refs found!