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Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g005777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015809 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g019759 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07631 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g12351 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12943 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18268 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g62402 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene02406.t1 | Aspi01Gene02406 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17121.t1 | CRR22, Aspi01Gene17121 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene20467.t1 | EMB2758, Aspi01Gene20467 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene28076.t1 | Aspi01Gene28076 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene35394.t1 | Aspi01Gene35394 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene45825.t1 | Aspi01Gene45825 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene67429.t1 | Aspi01Gene67429 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011443 | No alias | not classified & original description: CDS=1-2145 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0503.g073910 | No alias | not classified & original description: CDS=59-2179 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04086 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06451 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06497 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07735 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g17193 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45673 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G079600.1 | OTP84, Ceric.04G079600 | not classified & original description: pacid=50631214... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G075900.1 | Ceric.19G075900 | not classified & original description: pacid=50576584... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020553.200 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g04642 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05104 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10056 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g18746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19094 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g20337 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21876 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30273 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35986 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g42862 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43249 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08804 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21326 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23215 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g23579 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g36038 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46789 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g49830 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50096 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g23295 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g24725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030836001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g58980.1 | LOC_Os04g58980 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g39650.1 | LOC_Os06g39650 | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g45410.1 | LOC_Os11g45410 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04264 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04367 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g12137 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32914 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05679 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23160 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g37918 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g39469 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g04075 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15249 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22460 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g04317 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11821 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18013 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g60394 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63501 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03104 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g29965 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16308 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62422 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0101.g019756 | No alias | not classified & original description: CDS=1-2544 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0233.g026492 | No alias | not classified & original description: CDS=48-2072 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0345.g027287 | No alias | not classified & original description: CDS=1-2001 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29237 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo134538 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Smo26969 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24963 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g33790 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04472 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14556 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g34880 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e013166_P001 | Zm00001e013166 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| BP | GO:0006282 | regulation of DNA repair | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0080134 | regulation of response to stress | IEP | HCCA |
| BP | GO:0080135 | regulation of cellular response to stress | IEP | HCCA |
| BP | GO:2001020 | regulation of response to DNA damage stimulus | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 483 | 530 |
| IPR002885 | Pentatricopeptide_repeat | 77 | 123 |
| IPR002885 | Pentatricopeptide_repeat | 280 | 327 |
| IPR002885 | Pentatricopeptide_repeat | 179 | 225 |
| IPR002885 | Pentatricopeptide_repeat | 382 | 428 |
| IPR002885 | Pentatricopeptide_repeat | 254 | 277 |
| IPR002885 | Pentatricopeptide_repeat | 153 | 175 |
| IPR002885 | Pentatricopeptide_repeat | 457 | 479 |
| IPR002885 | Pentatricopeptide_repeat | 356 | 381 |
| No external refs found! |