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  5. Pir_g56461

Pir_g56461 (ATROPGEF1, ROPGEF1)


Aliases : ATROPGEF1, ROPGEF1

Description : RopGEF guanine nucleotide exchange factor *(PRONE) & original description: none


Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g56461

Target Alias Description ECC score Gene Family Method Actions
AT1G79860 ROPGEF12, MEE64,... RHO guanyl-nucleotide exchange factor 12 0.03 OrthoFinder output from all 47 species
AT2G45890 ATROPGEF4, RHS11, ROPGEF4 RHO guanyl-nucleotide exchange factor 4 0.04 OrthoFinder output from all 47 species
AT3G16130 PIRF2, ROPGEF13,... RHO guanyl-nucleotide exchange factor 13 0.03 OrthoFinder output from all 47 species
Adi_g114642 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72579.t1 ROPGEF7,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Ceric.04G001800.1 ROPGEF8,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Ceric.09G003400.1 ROPGEF8,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Ceric.1Z238900.1 ROPGEF8,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Ceric.33G011600.1 ROPGEF7,... RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.02 OrthoFinder output from all 47 species
Dac_g07468 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Dac_g12481 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.04 OrthoFinder output from all 47 species
Dcu_g13017 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Ehy_g17577 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019675 ROPGEF7, ATROPGEF7 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Solyc01g094610.4.1 ROPGEF3,... PRONE-type RopGEF guanine nucleotide exchange factor 0.02 OrthoFinder output from all 47 species
Spa_g01167 ATROPGEF1, ROPGEF1 RopGEF guanine nucleotide exchange factor *(PRONE) &... 0.03 OrthoFinder output from all 47 species
Spa_g44533 ATROPGEF1, ROPGEF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005512 PRONE_dom 124 488
No external refs found!