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  5. Pir_g54048

Pir_g54048


Description : alpha-class expansin & original description: none


Gene families : OG0005965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g54048
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0006.g009503 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=1-810 0.03 OrthoFinder output from all 47 species
Dcu_g17737 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38440 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18772 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16880 No alias alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g13913 No alias alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g11608 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20454 No alias alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27814 No alias alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g61538 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA

No InterPro domains available for this sequence

No external refs found!