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  5. Pir_g50742

Pir_g50742


Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g50742

Target Alias Description ECC score Gene Family Method Actions
Aev_g32263 WLIM1 LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os06g13030.1 WLIM1, LOC_Os06g13030 transcription factor (LIM) 0.05 OrthoFinder output from all 47 species
Len_g22091 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 172 227
IPR001781 Znf_LIM 75 130
No external refs found!