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Aliases : AtTCP14, TCP14
Description : TCP-type transcription factor & original description: none
Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g50317 | |
| Cluster | HCCA: Cluster_161 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00081210 | AT-TCP20, TCP20,... | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00040760 | evm_27.TU.AmTr_v1... | Multi-process regulation.circadian clock.morning element... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G35560 | No alias | TCP family transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| AT2G45680 | No alias | TCP family transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g055980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06733 | No alias | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene72040.t1 | AT-TCP20, TCP20,... | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030896 | No alias | TCP-type transcription factor & original description: CDS=1-1743 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15454 | No alias | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020011001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g42380.1 | LOC_Os02g42380 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g51280.1 | LOC_Os02g51280 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g43160.1 | LOC_Os08g43160 | transcription factor (TCP) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g07460.1 | LOC_Os11g07460 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g07480.1 | LOC_Os12g07480 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_81710g0010 | No alias | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g35770 | No alias | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g24235 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g27632 | AtTCP14, TCP14 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g068200.1.1 | AT-TCP20, TCP20,... | transcription factor (TCP). TCP20 circadian clock... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g006800.1.1 | Solyc03g006800 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g020670.1.1 | Solyc11g020670 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003744_P001 | Zm00001e003744 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016271_P001 | Zm00001e016271 | transcription factor (TCP). CHE circadian clock repression factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018800_P001 | AT-TCP20, TCP20,... | transcription factor (TCP). TCP20 circadian clock... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023066_P001 | Zm00001e023066 | transcription factor (TCP). CHE circadian clock repression factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024509_P001 | Zm00001e024509 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028426_P001 | AT-TCP20, TCP20,... | transcription factor (TCP). TCP20 circadian clock... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000149 | SNARE binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004017 | adenylate kinase activity | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006497 | protein lipidation | IEP | HCCA |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | HCCA |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
| BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
| MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019905 | syntaxin binding | IEP | HCCA |
| MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
| MF | GO:0022836 | gated channel activity | IEP | HCCA |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 86 | 253 |
| No external refs found! |