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Description : regulatory ubiquitin-protein ligase *(PRU2) & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g49925 | |
| Cluster | HCCA: Cluster_282 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00240920 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G49220 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G09120 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g040589 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07783 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene43906.t1 | Aspi01Gene43906 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G001200.1 | Ceric.21G001200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26675 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g30092 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01026978001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027769001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_26582 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g49550.1 | RHA3A, LOC_Os04g49550 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g06560.1 | LOC_Os07g06560 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g06090.1 | RHA3B, LOC_Os08g06090 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g37760.1 | ATL6, LOC_Os08g37760 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_132693g0010 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_19072g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_223372g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_37578g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g38125 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g30287 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo137213 | ATL5 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g123690.1.1 | Solyc03g123690 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g081790.1.1 | Solyc10g081790 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000396_P001 | Zm00001e000396 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000398_P001 | Zm00001e000398 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023234_P001 | BRH1, Zm00001e023234 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031439_P001 | Zm00001e031439 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035560_P001 | ATL3, Zm00001e035560 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041385_P001 | Zm00001e041385 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |