Aliases : ATROPGEF1, ROPGEF1
Description : RopGEF guanine nucleotide exchange factor *(PRONE) & original description: none
Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g49897 | |
Cluster | HCCA: Cluster_110 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G00460 | ROPGEF3, ATROPGEF3 | RHO guanyl-nucleotide exchange factor 3 | 0.04 | OrthoFinder output from all 47 species | |
Ceric.04G001800.1 | ROPGEF8,... | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g12481 | ROPGEF7, ATROPGEF7 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.04 | OrthoFinder output from all 47 species | |
Gb_04468 | ATROPGEF9, ROPGEF9 | PRONE-type RopGEF guanine nucleotide exchange factor | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g38000.1 | ROPGEF7,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g48640.1 | ROPGEF8,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g40270.1 | ROPGEF3,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.02 | OrthoFinder output from all 47 species | |
MA_66695g0010 | ROPGEF7, ATROPGEF7 | PRONE-type RopGEF guanine nucleotide exchange factor | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g086660.2.1 | ROPGEF7,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0003689 | DNA clamp loader activity | IEP | HCCA |
MF | GO:0004357 | glutamate-cysteine ligase activity | IEP | HCCA |
CC | GO:0005663 | DNA replication factor C complex | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005512 | PRONE_dom | 98 | 471 |
No external refs found! |