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  5. Pir_g49597

Pir_g49597 (ATRD22, RD22)


Aliases : ATRD22, RD22

Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g49597

Target Alias Description ECC score Gene Family Method Actions
AT1G23760 JP630, PG3 BURP domain-containing protein 0.03 OrthoFinder output from all 47 species
Als_g13993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72190.t1 USPL1, ATUSPL1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72191.t1 USPL1, ATUSPL1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g00568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00679 JP630, PG3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40283 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09461 PG1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32074 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c4_21630V3.1 Pp3c4_21630 polygalacturonase 1 0.01 OrthoFinder output from all 47 species
Solyc05g005550.4.1 PG2, Solyc05g005550 non-catalytic polygalacturonase regulator 0.03 OrthoFinder output from all 47 species
Solyc08g068130.1.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 150 365
No external refs found!