Pir_g47622

Description : subgroup ERF-I transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g47622

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	ERF72, EBP,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
AMTR_s00006p00266920	RAP2.11,...	External stimuli response.biotic...	0.03	OrthoFinder output from all 47 species
AMTR_s00079p00020610	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	OrthoFinder output from all 47 species
AT1G43160	RAP2.6	related to AP2 6	0.06	OrthoFinder output from all 47 species
AT4G34410	RRTF1	redox responsive transcription factor 1	0.04	OrthoFinder output from all 47 species
AT5G47230	ERF5, ATERF-5, ATERF5	ethylene responsive element binding factor 5	0.05	OrthoFinder output from all 47 species
AT5G51990	CBF4, DREB1D	C-repeat-binding factor 4	0.05	OrthoFinder output from all 47 species
AT5G61600	ERF104	ethylene response factor 104	0.05	OrthoFinder output from all 47 species
Adi_g017242	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.05	OrthoFinder output from all 47 species
Aev_g00443	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g09266	DEAR2	subgroup ERF-II transcription factor *(ERF19/20) &...	0.04	OrthoFinder output from all 47 species
Ala_g04908	No alias	subgroup ERF-I transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g07025	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ala_g10933	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene03223.t1	DEAR2, Aspi01Gene03223	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34446.t1	Aspi01Gene34446	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene35032.t1	Rap2.6L, Aspi01Gene35032	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43376.t1	DREB26, Aspi01Gene43376	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene43377.t1	DREB26, Aspi01Gene43377	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene47288.t1	Aspi01Gene47288	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cre14.g620500	ESR1, DRN	No description available	0.02	OrthoFinder output from all 47 species
Dac_g33437	TINY2	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dde_g25217	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g01023	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g29688	No alias	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01013905001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
GSVIVT01013918001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	OrthoFinder output from all 47 species
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_01212	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Gb_08382	RAP2.9, DEAR5	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_08541	No alias	transcription factor (DREB)	0.06	OrthoFinder output from all 47 species
Gb_15517	DEAR3	Ethylene-responsive transcription factor ERF008...	0.03	OrthoFinder output from all 47 species
Gb_24328	HRD	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Gb_34285	HRD	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Gb_41444	No alias	transcription factor (DREB)	0.06	OrthoFinder output from all 47 species
LOC_Os01g73770.1	CBF4, DREB1D,...	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
LOC_Os09g28440.1	RRTF1, LOC_Os09g28440	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os11g06770.2	ERF110, LOC_Os11g06770	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
MA_10427743g0020	TMO3, CRF2	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
MA_115502g0010	No alias	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
MA_121581g0010	No alias	Ethylene-responsive transcription factor RAP2-13...	0.03	OrthoFinder output from all 47 species
MA_9260020g0010	SHN3	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_9321671g0010	tny	transcription factor (DREB)	0.07	OrthoFinder output from all 47 species
MA_9565296g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Nbi_g00480	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g32986	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g35803	TINY2	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pnu_g20605	Rap2.6L	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g090770.1.1	ERF110, Solyc02g090770	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc04g014530.1.1	ERF1, ATERF1,...	transcription factor (ERF)	0.06	OrthoFinder output from all 47 species
Spa_g05271	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e004208_P001	Zm00001e004208	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e015312_P001	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e015326_P001	Zm00001e015326	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e015429_P001	Zm00001e015429	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e016064_P001	RAP2.2, Zm00001e016064	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Zm00001e023224_P001	Zm00001e023224	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e024669_P001	ERF110, Zm00001e024669	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e026989_P001	ERF110, Zm00001e026989	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e031783_P001	ERF110, Zm00001e031783	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e036260_P001	RAP2.12, Zm00001e036260	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	106	155

External Links

No external refs found!

Pir_g47622

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation