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  5. Pir_g47277

Pir_g47277


Description : not classified & original description: none


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g47277
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Als_g36519 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000752 ATEP3, EP3,... not classified & original description: CDS=1-1347 0.03 OrthoFinder output from all 47 species
Mp5g21830.1 HCHIB, B-CHI,... Endochitinase CH25 OS=Brassica napus... 0.03 OrthoFinder output from all 47 species
Ore_g29831 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g072000.4.1 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 97 299
IPR001002 Chitin-bd_1 28 66
No external refs found!