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  5. Pir_g45781

Pir_g45781


Description : not classified & original description: none


Gene families : OG0000033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g45781

Target Alias Description ECC score Gene Family Method Actions
AT3G05950 No alias RmlC-like cupins superfamily protein 0.04 OrthoFinder output from all 47 species
GSVIVT01000066001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g72300.1 GLP10, LOC_Os01g72300 Germin-like protein 1-4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10427432g0020 No alias Putative germin-like protein 2-2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_10429090g0010 GLP7 Germin-like protein subfamily 1 member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_179829g0010 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023215 GLP10 not classified & original description: CDS=1-651 0.04 OrthoFinder output from all 47 species
Solyc01g102400.3.1 GLP5, Solyc01g102400 Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc01g102895.1.1 GER2, ATGER2,... Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e021627_P001 Zm00001e021627 Germin-like protein 12-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e031079_P001 ATGER3, GLP3B,... Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e032937_P001 GLP10, Zm00001e032937 Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e039959_P001 Zm00001e039959 Germin-like protein 8-5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 69 201
No external refs found!