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  5. Pir_g45729

Pir_g45729


Description : not classified & original description: none


Gene families : OG0001373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g45729

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00035620 evm_27.TU.AmTr_v1... Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00021p00227090 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G64700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G71015 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g12299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00773 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011766001 At17.1 Uncharacterized protein At1g66480 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019671001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_33936 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g14780.1 LOC_Os06g14780 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_4360836g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_853405g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g39267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55076 At17.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g008210.4.1 At17.1, Solyc05g008210 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 165
No external refs found!