1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g45001

Pir_g45001


Description : Rab GTPase-activating protein & original description: none


Gene families : OG0001521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001521_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g45001
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AT5G57210 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene02544.t1 Aspi01Gene02544 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02565.t1 Aspi01Gene02565 Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14176 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02390 No alias Rab GTPase-activating protein & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32682 No alias Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 100 157
IPR000195 Rab-GTPase-TBC_dom 251 353
No external refs found!