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  5. Pir_g44428

Pir_g44428


Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g44428
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00234p00014000 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00234p00015090 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aspi01Gene16361.t1 PBP1, Aspi01Gene16361 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49047.t1 PBP1, Aspi01Gene49047 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63057.t1 PBP1, Aspi01Gene63057 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G059500.1 PBP1, Ceric.30G059500 not classified & original description: pacid=50608497... 0.04 OrthoFinder output from all 47 species
Ceric.30G059700.1 PBP1, Ceric.30G059700 not classified & original description: pacid=50608022... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57470.1 PBP1, LOC_Os01g57470 Calcium-binding protein PBP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g21962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10212526g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435835g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_25900g0020 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_48747g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g26313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41840 PBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 72 122
No external refs found!