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  5. Pir_g41935

Pir_g41935


Description : not classified & original description: none


Gene families : OG0002472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002472_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g41935
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Adi_g077508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g52841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39953 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000772 Ricin_B_lectin 382 423
IPR002509 NODB_dom 37 158
IPR000772 Ricin_B_lectin 295 376
IPR000772 Ricin_B_lectin 457 571
No external refs found!