1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g40698

Pir_g40698


Description : not classified & original description: none


Gene families : OG0001384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g40698
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00183970 evm_27.TU.AmTr_v1... Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G16430 JAL31 jacalin-related lectin 31 0.03 OrthoFinder output from all 47 species
AT3G16440 MLP-300B, MEE36,... myrosinase-binding protein-like protein-300B 0.03 OrthoFinder output from all 47 species
AT3G21380 No alias Mannose-binding lectin superfamily protein 0.03 OrthoFinder output from all 47 species
Gb_20108 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g24710.2 JAL23, LOC_Os01g24710 Salt stress-induced protein OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os01g25280.1 LOC_Os01g25280 Salt stress-induced protein OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os06g07250.1 LOC_Os06g07250 Protein GOS9 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
LOC_Os10g04270.1 LOC_Os10g04270 Horcolin OS=Hordeum vulgare subsp. vulgare... 0.02 OrthoFinder output from all 47 species
MA_237334g0010 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_43124g0010 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_769268g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g32027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37379 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc03g121300.2.1 Solyc03g121300 Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e026409_P002 Zm00001e026409 Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e029550_P002 Zm00001e029550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 23 225
IPR001229 Jacalin-like_lectin_dom 397 531
IPR001229 Jacalin-like_lectin_dom 701 834
IPR001229 Jacalin-like_lectin_dom 549 679
IPR001229 Jacalin-like_lectin_dom 248 379
No external refs found!