1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g40394

Pir_g40394


Description : regulatory protein *(FLZ) of SnRK1 complex & original description: none


Gene families : OG0000130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g40394
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT1G22160 No alias Protein of unknown function (DUF581) 0.03 OrthoFinder output from all 47 species
AT3G22550 No alias Protein of unknown function (DUF581) 0.04 OrthoFinder output from all 47 species
AT4G17670 No alias Protein of unknown function (DUF581) 0.03 OrthoFinder output from all 47 species
AT5G47060 No alias Protein of unknown function (DUF581) 0.03 OrthoFinder output from all 47 species
AT5G65040 No alias Protein of unknown function (DUF581) 0.03 OrthoFinder output from all 47 species
Adi_g012649 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.06 OrthoFinder output from all 47 species
Adi_g081604 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.05 OrthoFinder output from all 47 species
Aev_g02242 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.05 OrthoFinder output from all 47 species
Aop_g26041 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene04271.t1 Aspi01Gene04271 regulatory protein *(FLZ) of SnRK1 complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G011100.1 Ceric.13G011100 regulatory protein *(FLZ) of SnRK1 complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01008993001 No alias Multi-process regulation.SnRK1 metabolic regulator... 0.05 OrthoFinder output from all 47 species
LOC_Os03g46260.1 LOC_Os03g46260 SnRK1-interacting factor (FLZ) 0.02 OrthoFinder output from all 47 species
LOC_Os04g49680.1 LOC_Os04g49680 SnRK1-interacting factor (FLZ) 0.03 OrthoFinder output from all 47 species
LOC_Os08g31510.1 LOC_Os08g31510 SnRK1-interacting factor (FLZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g20240.1 LOC_Os09g20240 SnRK1-interacting factor (FLZ) 0.03 OrthoFinder output from all 47 species
Lfl_g28537 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.06 OrthoFinder output from all 47 species
MA_66837g0010 No alias SnRK1-interacting factor (FLZ) 0.03 OrthoFinder output from all 47 species
MA_7041008g0010 No alias SnRK1-interacting factor (FLZ) 0.05 OrthoFinder output from all 47 species
MA_75487g0010 No alias SnRK1-interacting factor (FLZ) 0.04 OrthoFinder output from all 47 species
Nbi_g24339 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007483 No alias regulatory protein *(FLZ) of SnRK1 complex & original... 0.03 OrthoFinder output from all 47 species
Solyc07g042190.3.1 Solyc07g042190 SnRK1-interacting factor (FLZ) 0.02 OrthoFinder output from all 47 species
Zm00001e004050_P002 Zm00001e004050 SnRK1-interacting factor (FLZ) 0.02 OrthoFinder output from all 47 species
Zm00001e004763_P001 Zm00001e004763 SnRK1-interacting factor (FLZ) 0.14 OrthoFinder output from all 47 species
Zm00001e012324_P001 Zm00001e012324 SnRK1-interacting factor (FLZ) 0.03 OrthoFinder output from all 47 species
Zm00001e023253_P001 Zm00001e023253 SnRK1-interacting factor (FLZ) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR007650 Zf-FLZ_dom 325 369
No external refs found!