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  5. Pir_g39573

Pir_g39573 (JAS1, JAZ10, TIFY9)


Aliases : JAS1, JAZ10, TIFY9

Description : TIFY-type transcription factor & original description: none


Gene families : OG0009767 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009767_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g39573
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT1G30135 JAZ8, TIFY5A jasmonate-zim-domain protein 8 0.02 OrthoFinder output from all 47 species
AT2G34600 JAZ7, TIFY5B jasmonate-zim-domain protein 7 0.03 OrthoFinder output from all 47 species
GSVIVT01021519001 JAZ8, TIFY5A RNA biosynthesis.transcriptional activation.TIFY... 0.03 OrthoFinder output from all 47 species
Solyc08g036505.2.1 Solyc08g036505 transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Solyc08g036640.3.1 JAZ8, TIFY5A,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Solyc08g036660.4.1 JAS1, JAZ10,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010399 Tify_dom 88 117
IPR018467 CCT_CS 154 173
No external refs found!