Pir_g39319

Description : subgroup ERF-III transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g39319

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00044590	DREB2A, DREB2,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
AT1G12980	ESR1, DRN	Integrase-type DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
AT2G40350	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.03	OrthoFinder output from all 47 species
Adi_g059575	ORA47	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Aop_g38999	ORA47	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cre08.g364400	RAP2.2	No description available	0.01	OrthoFinder output from all 47 species
Cre14.g620500	ESR1, DRN	No description available	0.01	OrthoFinder output from all 47 species
GSVIVT01022277001	ABR1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_01216	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Gb_17207	DREB2A, DREB2	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Gb_17211	DREB2A, DREB2	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os05g49700.1	LOC_Os05g49700	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os06g03670.1	DREB1A, ATCBF3,...	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Lfl_g03205	CRF3	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g06071	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
MA_16778g0010	DREB2A, DREB2	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Mp1g20040.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Msp_g14031	ATERF4, RAP2.5,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g02380	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g05242	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09943	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g18921	No alias	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Sam_g39915	No alias	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc05g052030.1.1	Solyc05g052030	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Spa_g55358	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g00486	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Zm00001e023686_P001	Zm00001e023686	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	HCCA
MF	GO:0003883	CTP synthase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005778	peroxisomal membrane	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
BP	GO:0016559	peroxisome fission	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016744	transketolase or transaldolase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031903	microbody membrane	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0042176	regulation of protein catabolic process	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	115	164

External Links

No external refs found!

Pir_g39319

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation